Projects
Apps, data visualizations, and tools built around scientific workflows, public data, and interactive exploration.
R · D3.js
An R package for plotting gene clusters and transcripts. It imports GenBank, FASTA, and GFF files, runs BlastP and MUMmer alignments, and puts the results straight onto gene arrow maps. Labels, annotations, legends, scales, colors, and tooltips are all configurable.
React · Express · Node.js · MySQL · MUI
An interactive website that uncovers the salaries of all government employees in Bermuda.
React · D3.js · Tailwind
An interactive graph that lets users explore salary information by employee, department, and job title.
R · Shiny · Genomics
A collection of Shiny applications to process FASTA sequence files.
R · Shiny · PDB
A Shiny app to interact with Protein Data Bank files in the browser. Winner in the 2021 Shiny contest.
R package · Shiny
An R package to visualize and interact with protein structure files in R and Shiny applications.
R · Shiny · Mass Spectrometry
A Shiny application for annotation of peptide fragment ions.
R · Shiny · DT
An interactive employee directory built with DT and Shiny. Winner of the RStudio Table Contest.
R · Shiny · Proteomics
A Shiny app to match fragment masses detected by mass spectrometry to a protein sequence.